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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4436712_4437064_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4436712 - 4437064

Intron Length:

353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTTAA

U12 Branch Point Sequence:

AGCAGCTTAAGC

Flanking Amino Acid:

QVSEVRIGSSKRFGYVDFLS

Intron Amino Acid Position:

326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.5

27.6

Major BPS

58.3

0.21

1.1

49.4

37.6

Major PPT

0.83

0.7

84.6

30.3

Minor 5ss

42.2

-0.9

2.7

50.9

39.6

Minor BPS

46.6

-0.2

2.1

53.99

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012897

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013467

4433705 - 4440944

7240