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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4475405_4478257_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4475405 - 4478257

Intron Length:

2853

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TATTCATCACCC

Flanking Amino Acid:

TPGYHRTAYPMPENDAVSCH

Intron Amino Acid Position:

666

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

80.1

34.8

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

85.6

0.8

0.7

77.5

31.3

Minor 5ss

40.2

-1.1

3.1

54.8

42.5

Minor BPS

50.3

-0

2.1

69.46

41.4

Associated Gene:

Gene:

ARMC9

Ensembl Gene ID:

ENSAPLG00000013385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030253

4464224 - 4525247

61024

ENSAPLT00000013978

4464224 - 4525247

61024