Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_4478374_4479151_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4478374 - 4479151

Intron Length:

778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

ACCTGTGTATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

ATTTCCTTATTA

Flanking Amino Acid:

EKLLTTEYLGIMTHTPKTKK

Intron Amino Acid Position:

628

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

68.6

36.4

Major BPS

76.9

0.67

1.2

31.9

Major PPT

64.7

0.33

62.1

42.7

Minor 5ss

32.8

-2

2.6

34.8

34.3

Minor BPS

74.4

0.76

1.5

81.77

33.5

Associated Gene:

Gene:

ARMC9

Ensembl Gene ID:

ENSAPLG00000013385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013978

4464224 - 4525247

61024

ENSAPLT00000030253

4464224 - 4525247

61024