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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4489200_4490003_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4489200 - 4490003

Intron Length:

804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTTAC

5'SS Class:

weak_major

3'SS Sequence:

TCTCCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTTTTCAAGC

Flanking Amino Acid:

LLMNLCLRSAGKKMCARIAN

Intron Amino Acid Position:

492

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

35.7

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

85.6

0.8

0.7

80.2

Minor 5ss

57.5

0.25

69.7

41.2

Minor BPS

0.26

1.8

73.67

37.7

Associated Gene:

Gene:

ARMC9

Ensembl Gene ID:

ENSAPLG00000013385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030253

4464224 - 4525247

61024

ENSAPLT00000013978

4464224 - 4525247

61024