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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4496754_4503146_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4496754 - 4503146

Intron Length:

6393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTGATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTTTCCTGATCC

Flanking Amino Acid:

YSMSPCDDGYASTMLRASIA

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

81.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

77.4

0.62

0.9

69.8

40.6

Minor 5ss

39.7

-1.2

3.4

57.1

40.8

Minor BPS

70.6

0.63

1.7

83.6

35.6

Associated Gene:

Gene:

ARMC9

Ensembl Gene ID:

ENSAPLG00000013385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030253

4464224 - 4525247

61024