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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4518176_4519284_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

4518176 - 4519284

Intron Length:

1109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

ACTCATACAACAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

TTTTCCTGAACA

Flanking Amino Acid:

SQTPRLLTLFKENGQCNKEM

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.9

0.02

1.2

57.1

42.4

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

62.5

0.28

55.9

Minor 5ss

98.8

1.64

0.5

12.5

Minor BPS

85.6

1.11

1.2

92.78

26.2

Associated Gene:

Gene:

ARMC9

Ensembl Gene ID:

ENSAPLG00000013385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030253

4464224 - 4525247

61024

ENSAPLT00000013978

4464224 - 4525247

61024