Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_4522295_4522670_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4522295 - 4522670

Intron Length:

376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTTC

5'SS Class:

major

3'SS Sequence:

TTTTATTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

CAGTCTTCAAAA

Flanking Amino Acid:

YLLKHSVGKPDKAELEERIS

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

1.1

75.6

35.1

Major BPS

78.2

0.7

79.9

32.6

Major PPT

83.4

0.75

0.7

77.4

36.6

Minor 5ss

47.7

-0.2

2.8

71.6

38.3

Minor BPS

50.4

0.01

1.7

57.89

41.6

Associated Gene:

Gene:

ARMC9

Ensembl Gene ID:

ENSAPLG00000013385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030253

4464224 - 4525247

61024

ENSAPLT00000013978

4464224 - 4525247

61024