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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4536618_4538297_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4536618 - 4538297

Intron Length:

1680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGGGTGTA

5'SS Class:

major

3'SS Sequence:

CCCCTCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAA

U12 Branch Point Sequence:

ACAACGTTGATT

Flanking Amino Acid:

EKKEEEKMEVDETEKKDEKE

Intron Amino Acid Position:

849

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

70.2

35.8

Major BPS

70.2

0.5

71.6

30.1

Major PPT

73.4

0.53

0.7

67.3

26.2

Minor 5ss

29.6

-2.3

3.4

36.2

43.3

Minor BPS

47.5

-0.1

2.1

62.4

Associated Gene:

Gene:

PSMD1

Ensembl Gene ID:

ENSAPLG00000013690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014412

4532868 - 4599525

66658