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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4541940_4547141_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4541940 - 4547141

Intron Length:

5202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTCCC

5'SS Class:

strong_major

3'SS Sequence:

TGATTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

AATTCATTAATT

Flanking Amino Acid:

AILAQGILDAGGHNVTISLQ

Intron Amino Acid Position:

730

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

71.7

38.4

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

80.1

0.68

0.9

73.9

36.5

Minor 5ss

35.6

-1.6

2.8

Minor BPS

73.1

0.8

1.5

85.27

34.3

Associated Gene:

Gene:

PSMD1

Ensembl Gene ID:

ENSAPLG00000013690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014412

4532868 - 4599525

66658

ENSAPLT00000032855

4537229 - 4599525

62297