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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4547245_4554914_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4547245 - 4554914

Intron Length:

7670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

AATTTTATAATC

Flanking Amino Acid:

IQQTEITCPKVSQFRQLYSK

Intron Amino Acid Position:

696

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

82.6

29.4

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

78.8

0.65

0.8

70.6

35.2

Minor 5ss

35.2

-1.7

49.1

46.7

Minor BPS

57.4

0.21

1.5

66.3

32.9

Associated Gene:

Gene:

PSMD1

Ensembl Gene ID:

ENSAPLG00000013690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032855

4537229 - 4599525

62297

ENSAPLT00000014412

4532868 - 4599525

66658