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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4555032_4557992_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4555032 - 4557992

Intron Length:

2961

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGACC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

GCAGTATTAACT

Flanking Amino Acid:

GICCAGTGNKEAINLLEPMT

Intron Amino Acid Position:

657

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

75.6

33.8

Major BPS

81.9

0.79

0.8

81.9

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

28.1

-2.5

34.6

41.4

Minor BPS

52.4

0.15

1.7

66.22

44.1

Associated Gene:

Gene:

PSMD1

Ensembl Gene ID:

ENSAPLG00000013690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032855

4537229 - 4599525

62297

ENSAPLT00000014412

4532868 - 4599525

66658