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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4558108_4586442_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4558108 - 4586442

Intron Length:

28335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTAT

5'SS Class:

major

3'SS Sequence:

TGCCTTTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATAAT

U12 Branch Point Sequence:

TAAGAAATAACA

Flanking Amino Acid:

AVESLGFILFRTPEQCPSVV

Intron Amino Acid Position:

618

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

69.1

Major BPS

67.7

0.44

1.1

67.9

34.4

Major PPT

78.6

0.64

0.8

77.1

31.6

Minor 5ss

36.7

-1.5

3.6

55.1

49.1

Minor BPS

44.2

-0.4

57.26

40.9

Associated Gene:

Gene:

PSMD1

Ensembl Gene ID:

ENSAPLG00000013690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032855

4537229 - 4599525

62297

ENSAPLT00000014412

4532868 - 4599525

66658