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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4574188_4576271_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4574188 - 4576271

Intron Length:

2084

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

ATATATTGAAGT

Flanking Amino Acid:

KIIIVWLISIGIAIPVPIRG

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

36.6

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

85.2

0.79

0.6

78.4

30.4

Minor 5ss

38.1

-1.3

3.1

48.2

47.9

Minor BPS

48.9

-0

1.9

69.26

41.3

Associated Gene:

Gene:

HTR2B

Ensembl Gene ID:

ENSAPLG00000015179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015817

4567021 - 4577152

10132