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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4587147_4587722_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4587147 - 4587722

Intron Length:

576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TATATGTTAAAT

Flanking Amino Acid:

ALIESLCRDKDPILRRSGMY

Intron Amino Acid Position:

565

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.04

0.7

89.2

17.6

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

88.6

0.87

0.7

80.8

31.2

Minor 5ss

38.3

-1.3

2.9

47.2

Minor BPS

51.8

0.14

2.2

74.98

41.3

Associated Gene:

Gene:

PSMD1

Ensembl Gene ID:

ENSAPLG00000013690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032855

4537229 - 4599525

62297

ENSAPLT00000014412

4532868 - 4599525

66658