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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4587920_4588537_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4587920 - 4588537

Intron Length:

618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTGCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAGGAG

U12 Branch Point Sequence:

GTTTGCTGGATT

Flanking Amino Acid:

TNLYQDDAVTGEAAGLALGL

Intron Amino Acid Position:

499

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

87.7

26.2

Major BPS

44.4

-0.3

1.8

45.5

47.5

Major PPT

0.47

65.1

41.2

Minor 5ss

-1.4

3.5

57.8

46.8

Minor BPS

54.3

0.22

76.54

40.3

Associated Gene:

Gene:

PSMD1

Ensembl Gene ID:

ENSAPLG00000013690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032855

4537229 - 4599525

62297

ENSAPLT00000014412

4532868 - 4599525

66658