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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4589735_4590834_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4589735 - 4590834

Intron Length:

1100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTTG

5'SS Class:

strong_major

3'SS Sequence:

ACTGGACATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCTAT

U12 Branch Point Sequence:

TTCTGCTGGACA

Flanking Amino Acid:

ATASLGVIHKGHEKEALQLM

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

72.8

39.1

Major BPS

56.2

0.15

1.3

54.7

42.5

Major PPT

60.8

0.24

1.1

41.6

Minor 5ss

39.7

-1.2

3.4

49.2

Minor BPS

55.2

0.16

71.06

41.3

Associated Gene:

Gene:

PSMD1

Ensembl Gene ID:

ENSAPLG00000013690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032855

4537229 - 4599525

62297

ENSAPLT00000014412

4532868 - 4599525

66658