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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4592582_4594072_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4592582 - 4594072

Intron Length:

1491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTGAGTGTC

5'SS Class:

major

3'SS Sequence:

CTTACATGTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

CTTTGCTTACAT

Flanking Amino Acid:

STSAGKSAEVNPEPKDQISK

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

70.5

33.5

Major BPS

0.87

0.8

85.6

Major PPT

60.2

0.23

1.2

59.7

39.8

Minor 5ss

34.4

-1.8

3.4

49.4

41.4

Minor BPS

0.17

2.2

76.73

45.7

Associated Gene:

Gene:

PSMD1

Ensembl Gene ID:

ENSAPLG00000013690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032855

4537229 - 4599525

62297

ENSAPLT00000014412

4532868 - 4599525

66658