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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4594134_4595513_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4594134 - 4595513

Intron Length:

1380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGGAA

5'SS Class:

major

3'SS Sequence:

TATTCTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTGCATTTTATT

Flanking Amino Acid:

TGTVPGSEKDSDAMEAEEKP

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

65.3

36.2

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

90.4

0.91

0.7

88.7

27.9

Minor 5ss

21.7

-3.3

3.4

27.5

44.3

Minor BPS

49.3

0.03

1.8

70.01

41.1

Associated Gene:

Gene:

PSMD1

Ensembl Gene ID:

ENSAPLG00000013690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032855

4537229 - 4599525

62297

ENSAPLT00000014412

4532868 - 4599525

66658