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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4595741_4596546_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4595741 - 4596546

Intron Length:

806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACTTC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTCCCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTTCTTTTCT

Flanking Amino Acid:

EKPDFINVCQCLIFLDDPQA

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.6

35.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

78.8

0.65

0.7

76.7

25.3

Minor 5ss

47.8

-0.2

2.9

67.4

Minor BPS

47.9

-0

3.6

87.49

38.1

Associated Gene:

Gene:

PSMD1

Ensembl Gene ID:

ENSAPLG00000013690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032855

4537229 - 4599525

62297

ENSAPLT00000014412

4532868 - 4599525

66658