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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4596691_4598058_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4596691 - 4598058

Intron Length:

1368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTACGTGCA

5'SS Class:

major

3'SS Sequence:

ACTTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

CAAACCTAAACT

Flanking Amino Acid:

DIFEKTILESNDVPGMLAYS

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

66.5

39.3

Major BPS

78.6

0.71

79.6

32.9

Major PPT

83.3

0.75

0.9

80.8

36.2

Minor 5ss

32.4

-2

3.3

41.6

44.9

Minor BPS

58.1

0.33

1.8

70.93

45.3

Associated Gene:

Gene:

PSMD1

Ensembl Gene ID:

ENSAPLG00000013690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014412

4532868 - 4599525

66658

ENSAPLT00000032855

4537229 - 4599525

62297