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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4619816_4622038_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4619816 - 4622038

Intron Length:

2223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTCAGGCAG

5'SS Class:

weak_major

3'SS Sequence:

ACTAACATGATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TCTACCTTAGTT

Flanking Amino Acid:

MLPLKPLQFGNSHWHLVFV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.6

0.06

1.4

46.1

43.5

Major BPS

79.2

0.73

75.3

39.4

Major PPT

53.9

0.09

1.1

47.6

39.4

Minor 5ss

28.1

-2.5

3.2

36.3

41.6

Minor BPS

0.61

1.6

80.64

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039540

4619789 - 4627375

7587