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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4646313_4648506_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4646313 - 4648506

Intron Length:

2194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACATATT

5'SS Class:

strong_major

3'SS Sequence:

ACACTCTGGACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

ACACTCTGGACA

Flanking Amino Acid:

EACRRIGVPQDNLCSPSDIL

Intron Amino Acid Position:

815

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

84.4

33.4

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

57.8

0.18

1.1

53.2

40.8

Minor 5ss

39.9

-1.1

3.2

59.8

44.7

Minor BPS

-0

1.4

55.18

Associated Gene:

Gene:

LRCH3

Ensembl Gene ID:

ENSAPLG00000015330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033939

4645800 - 4703526

57727

ENSAPLT00000033629

4645800 - 4703526

57727

ENSAPLT00000029219

4645800 - 4703526

57727