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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4648585_4650740_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4648585 - 4650740

Intron Length:

2156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

GCCTCCTTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCAAT

U12 Branch Point Sequence:

TTCCAATTAAGA

Flanking Amino Acid:

PSIHVPSPAVPKLTMAKCRR

Intron Amino Acid Position:

789

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

76.5

38.6

Major BPS

71.8

0.54

1.2

32.5

Major PPT

78.7

0.65

0.8

72.2

32.4

Minor 5ss

41.9

-0.9

2.8

57.5

Minor BPS

47.7

-0.1

2.1

63.12

42.6

Associated Gene:

Gene:

LRCH3

Ensembl Gene ID:

ENSAPLG00000015330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029219

4645800 - 4703526

57727

ENSAPLT00000047526

4630494 - 4703526

73033

ENSAPLT00000020407

4642921 - 4703526

60606

ENSAPLT00000044020

4642921 - 4703526

60606

ENSAPLT00000016006

4642538 - 4703526

60989

ENSAPLT00000033939

4645800 - 4703526

57727

ENSAPLT00000033629

4645800 - 4703526

57727