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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4650879_4652358_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4650879 - 4652358

Intron Length:

1480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCATTTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TCATTTTTCACA

Flanking Amino Acid:

ELELIEQLRKNIESRLKVSL

Intron Amino Acid Position:

743

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

25.6

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

83.7

0.76

0.8

79.3

32.4

Minor 5ss

35.3

-1.7

3.2

50.4

Minor BPS

57.2

0.22

1.7

66.93

40.2

Associated Gene:

Gene:

LRCH3

Ensembl Gene ID:

ENSAPLG00000015330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033629

4645800 - 4703526

57727

ENSAPLT00000029219

4645800 - 4703526

57727

ENSAPLT00000047526

4630494 - 4703526

73033

ENSAPLT00000020407

4642921 - 4703526

60606

ENSAPLT00000044020

4642921 - 4703526

60606

ENSAPLT00000016006

4642538 - 4703526

60989

ENSAPLT00000033939

4645800 - 4703526

57727