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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4652478_4653104_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4652478 - 4653104

Intron Length:

627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TGCTACTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

CTTTCCTTCATG

Flanking Amino Acid:

RTAVRDEANKVVTSSSTHAL

Intron Amino Acid Position:

703

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

78.4

32.4

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

80.4

0.68

0.9

76.9

36.9

Minor 5ss

39.1

-1.2

3.1

51.5

45.7

Minor BPS

65.8

0.35

1.8

70.75

43.1

Associated Gene:

Gene:

LRCH3

Ensembl Gene ID:

ENSAPLG00000015330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033629

4645800 - 4703526

57727

ENSAPLT00000029219

4645800 - 4703526

57727

ENSAPLT00000047526

4630494 - 4703526

73033

ENSAPLT00000020407

4642921 - 4703526

60606

ENSAPLT00000044020

4642921 - 4703526

60606

ENSAPLT00000016006

4642538 - 4703526

60989

ENSAPLT00000033939

4645800 - 4703526

57727