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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4653219_4653734_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4653219 - 4653734

Intron Length:

516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGGG

5'SS Class:

major

3'SS Sequence:

CGCGTTTGTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCCT

U12 Branch Point Sequence:

TCCTCCTTTCCT

Flanking Amino Acid:

ISPGSPTTQTVHLSPPYPGH

Intron Amino Acid Position:

665

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.2

60.8

44.4

Major BPS

34.6

-0.9

4.2

73.6

41.8

Major PPT

66.8

0.38

64.8

41.3

Minor 5ss

35.4

-1.7

3.4

47.6

47.9

Minor BPS

45.2

-0.2

3.6

75.7

46.9

Associated Gene:

Gene:

LRCH3

Ensembl Gene ID:

ENSAPLG00000015330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029219

4645800 - 4703526

57727

ENSAPLT00000047526

4630494 - 4703526

73033

ENSAPLT00000020407

4642921 - 4703526

60606

ENSAPLT00000044020

4642921 - 4703526

60606

ENSAPLT00000016006

4642538 - 4703526

60989

ENSAPLT00000033939

4645800 - 4703526

57727

ENSAPLT00000033629

4645800 - 4703526

57727