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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4656469_4659655_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4656469 - 4659655

Intron Length:

3187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGATCC

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCCTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCCT

U12 Branch Point Sequence:

CTGTCCCTGACA

Flanking Amino Acid:

QHTDDSALLVNGFEPLFVFE

Intron Amino Acid Position:

598

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

71.3

33.2

Major BPS

34.6

-0.9

4.2

73.6

41.8

Major PPT

69.7

0.44

64.9

36.5

Minor 5ss

39.3

-1.2

49.1

41.1

Minor BPS

62.1

0.37

1.7

71.13

41.2

Associated Gene:

Gene:

LRCH3

Ensembl Gene ID:

ENSAPLG00000015330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029219

4645800 - 4703526

57727

ENSAPLT00000020407

4642921 - 4703526

60606

ENSAPLT00000016006

4642538 - 4703526

60989

ENSAPLT00000044020

4642921 - 4703526

60606