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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4661771_4661925_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4661771 - 4661925

Intron Length:

155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGCGT

5'SS Class:

major

3'SS Sequence:

TGTTTTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

TCTGTCTTAACA

Flanking Amino Acid:

LLSLPSHHSQVPSTDPELHR

Intron Amino Acid Position:

517

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.2

64.3

47.1

Major BPS

77.1

0.67

77.9

32.2

Major PPT

84.7

0.78

0.9

76.9

42.1

Minor 5ss

-1.4

3.4

56.8

47.4

Minor BPS

74.7

0.77

1.3

78.35

38.8

Associated Gene:

Gene:

LRCH3

Ensembl Gene ID:

ENSAPLG00000015330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020407

4642921 - 4703526

60606

ENSAPLT00000044020

4642921 - 4703526

60606

ENSAPLT00000016006

4642538 - 4703526

60989

ENSAPLT00000033939

4645800 - 4703526

57727

ENSAPLT00000033629

4645800 - 4703526

57727

ENSAPLT00000029219

4645800 - 4703526

57727

ENSAPLT00000047526

4630494 - 4703526

73033