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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4662502_4664984_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4662502 - 4664984

Intron Length:

2483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTACCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

TGGTGTTTACCT

Flanking Amino Acid:

KTENRYLHQNRDTDELRRPE

Intron Amino Acid Position:

467

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

89.9

22.1

Major BPS

71.4

0.53

1.1

63.4

Major PPT

81.2

0.7

0.8

74.8

35.1

Minor 5ss

37.1

-1.5

48.8

46.9

Minor BPS

51.4

0.12

2.1

71.92

45.4

Associated Gene:

Gene:

LRCH3

Ensembl Gene ID:

ENSAPLG00000015330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033629

4645800 - 4703526

57727

ENSAPLT00000029219

4645800 - 4703526

57727

ENSAPLT00000020407

4642921 - 4703526

60606

ENSAPLT00000047526

4630494 - 4703526

73033

ENSAPLT00000016006

4642538 - 4703526

60989

ENSAPLT00000033939

4645800 - 4703526

57727