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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4665056_4667646_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4665056 - 4667646

Intron Length:

2591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGTGCTT

5'SS Class:

major

3'SS Sequence:

TTATTCTGCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATACAT

U12 Branch Point Sequence:

TTATTCTGCATA

Flanking Amino Acid:

YIDQRRISNEGSPVKPVSVR

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.1

62.3

43.6

Major BPS

66.1

0.4

31.5

Major PPT

72.5

0.51

0.9

69.1

36.9

Minor 5ss

29.9

-2.3

3.7

46.8

48.6

Minor BPS

51.5

0.04

1.9

68.52

38.1

Associated Gene:

Gene:

LRCH3

Ensembl Gene ID:

ENSAPLG00000015330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033629

4645800 - 4703526

57727

ENSAPLT00000029219

4645800 - 4703526

57727

ENSAPLT00000047526

4630494 - 4703526

73033

ENSAPLT00000020407

4642921 - 4703526

60606

ENSAPLT00000044020

4642921 - 4703526

60606

ENSAPLT00000016006

4642538 - 4703526

60989

ENSAPLT00000033939

4645800 - 4703526

57727