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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4667796_4670167_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4667796 - 4670167

Intron Length:

2372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TATGTATGTCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

CTTTGTGTATGT

Flanking Amino Acid:

RGSTVVTNGGVEHDLDQIDY

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.3

1.11

0.7

90.9

28.7

Major BPS

85.7

0.89

0.8

22.2

Major PPT

0.23

1.2

57.3

46.6

Minor 5ss

37.5

-1.4

2.8

51.6

44.9

Minor BPS

39.4

-0.7

2.6

62.39

48.2

Associated Gene:

Gene:

LRCH3

Ensembl Gene ID:

ENSAPLG00000015330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029219

4645800 - 4703526

57727

ENSAPLT00000047526

4630494 - 4703526

73033

ENSAPLT00000020407

4642921 - 4703526

60606

ENSAPLT00000044020

4642921 - 4703526

60606

ENSAPLT00000016006

4642538 - 4703526

60989

ENSAPLT00000033939

4645800 - 4703526

57727

ENSAPLT00000033629

4645800 - 4703526

57727