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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4671140_4673871_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4671140 - 4673871

Intron Length:

2732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTTTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

GTTGCACTAACT

Flanking Amino Acid:

YDRRPMGFGSCHEELYSSRP

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

68.7

0.47

0.9

67.9

Major PPT

75.7

0.58

1.1

72.2

42.7

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

54.6

0.22

2.1

79.08

42.4

Associated Gene:

Gene:

LRCH3

Ensembl Gene ID:

ENSAPLG00000015330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029219

4645800 - 4703526

57727

ENSAPLT00000047526

4630494 - 4703526

73033

ENSAPLT00000020407

4642921 - 4703526

60606

ENSAPLT00000044020

4642921 - 4703526

60606

ENSAPLT00000016006

4642538 - 4703526

60989

ENSAPLT00000033939

4645800 - 4703526

57727

ENSAPLT00000033629

4645800 - 4703526

57727