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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4726732_4729467_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4726732 - 4729467

Intron Length:

2736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCCGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

TGGGCCCTAACC

Flanking Amino Acid:

ILYHGLIHDKVCCRQKDYWQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

81.2

32.7

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

64.7

0.33

61.2

Minor 5ss

35.9

-1.6

3.5

51.5

45.7

Minor BPS

57.9

0.23

1.8

67.9

43.4

Associated Gene:

Gene:

RUBCN

Ensembl Gene ID:

ENSAPLG00000028807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023500

4722032 - 4733428

11397