Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_4774276_4774393_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4774276 - 4774393

Intron Length:

118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACGGCAC

5'SS Class:

major

3'SS Sequence:

GTCGTCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCAAT

U12 Branch Point Sequence:

TTCTCCTGTCGT

Flanking Amino Acid:

RPDQHRSPGTDVRGLWLYRL

Intron Amino Acid Position:

1367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

55.4

43.7

Major BPS

59.5

0.24

1.3

68.4

35.9

Major PPT

68.2

0.41

0.9

58.3

38.5

Minor 5ss

30.5

-2.2

3.5

41.8

45.1

Minor BPS

36.9

-0.9

3.7

68.51

47.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010743

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011181

4770596 - 4779744

9149