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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4782370_4782773_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4782370 - 4782773

Intron Length:

404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTGGC

5'SS Class:

major

3'SS Sequence:

CAGCCTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTCAG

U12 Branch Point Sequence:

TGACCGTCAGCC

Flanking Amino Acid:

GYRPSEKIRLVQDMVHGVTT

Intron Amino Acid Position:

1166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

65.5

39.9

Major BPS

44.4

-0.3

1.6

48.7

45.1

Major PPT

64.2

0.32

0.9

54.3

36.2

Minor 5ss

31.8

-2.1

3.4

40.2

41.3

Minor BPS

42.1

-0.6

2.3

54.35

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040135

4781931 - 4801342

19412

ENSAPLT00000025176

4780931 - 4793631

12701

ENSAPLT00000018600

4780931 - 4793631

12701