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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4784126_4784886_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4784126 - 4784886

Intron Length:

761

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGTCGG

5'SS Class:

major

3'SS Sequence:

CGTTGCATCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTGCAT

U12 Branch Point Sequence:

GGACCCTCACCA

Flanking Amino Acid:

RPPQPSILLTKPSYDPVSEE

Intron Amino Acid Position:

759

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

57.3

47.4

Major BPS

57.3

0.18

1.6

71.4

45.1

Major PPT

64.5

0.33

0.9

55.1

40.1

Minor 5ss

34.9

-1.7

2.9

37.9

40.7

Minor BPS

47.5

-0.1

1.8

56.26

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040135

4781931 - 4801342

19412

ENSAPLT00000018600

4780931 - 4793631

12701