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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4784932_4785492_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4784932 - 4785492

Intron Length:

561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCGGC

5'SS Class:

major

3'SS Sequence:

TCTTCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCCT

U12 Branch Point Sequence:

TCTCTCTTCTCC

Flanking Amino Acid:

RPTQLPGRAKRQPPPRPPQP

Intron Amino Acid Position:

744

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

64.5

41.5

Major BPS

37.5

-0.7

4.3

79.6

35.6

Major PPT

86.3

0.82

0.7

81.2

23.9

Minor 5ss

38.4

-1.3

3.4

50.1

40.9

Minor BPS

40.7

-0.7

3.5

62.84

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040135

4781931 - 4801342

19412

ENSAPLT00000018600

4780931 - 4793631

12701