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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4787324_4789935_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4787324 - 4789935

Intron Length:

2612

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGCAC

5'SS Class:

major

3'SS Sequence:

TTTTGTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

CCGTCCCTAACG

Flanking Amino Acid:

MNDIITVIEGRAENYWWRGQ

Intron Amino Acid Position:

648

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

58.5

40.4

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

86.1

0.81

0.7

84.9

29.9

Minor 5ss

37.2

-1.4

3.3

50.1

46.5

Minor BPS

57.4

0.09

1.9

59.63

47.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025176

4780931 - 4793631

12701

ENSAPLT00000018600

4780931 - 4793631

12701

ENSAPLT00000040135

4781931 - 4801342

19412