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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4790031_4790248_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4790031 - 4790248

Intron Length:

218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCGGG

5'SS Class:

major

3'SS Sequence:

GTCCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

GTGTGCTCACCC

Flanking Amino Acid:

FVALRDFLMEAQPTDMRALQ

Intron Amino Acid Position:

617

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

1.1

47.1

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

0.41

0.8

58.1

33.2

Minor 5ss

34.3

-1.8

3.6

46.4

Minor BPS

45.9

-0.3

2.2

59.13

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040135

4781931 - 4801342

19412

ENSAPLT00000025176

4780931 - 4793631

12701

ENSAPLT00000018600

4780931 - 4793631

12701