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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4791012_4791220_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4791012 - 4791220

Intron Length:

209

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CCCCGTGGCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCCTGAC

U12 Branch Point Sequence:

CTGGCCTGACCA

Flanking Amino Acid:

GVVLSHPMKMVTELAPLGSL

Intron Amino Acid Position:

433

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

67.6

37.6

Major BPS

51.1

0.03

1.2

39.9

Major PPT

57.2

0.16

39.3

Minor 5ss

27.7

-2.6

29.4

36.9

Minor BPS

48.5

-0.1

1.9

59.56

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040135

4781931 - 4801342

19412

ENSAPLT00000025176

4780931 - 4793631

12701

ENSAPLT00000018600

4780931 - 4793631

12701