Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_4791374_4791495_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4791374 - 4791495

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGGGGC

5'SS Class:

major

3'SS Sequence:

TGTTTGGCTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTTAT

U12 Branch Point Sequence:

TCGGGTTTATTT

Flanking Amino Acid:

GEWCTPAGKTLNVAVKCLKT

Intron Amino Acid Position:

382

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

58.8

40.6

Major BPS

63.5

0.34

1.4

57.4

49.1

Major PPT

72.1

0.5

66.2

40.8

Minor 5ss

24.6

-2.9

3.4

32.5

42.6

Minor BPS

44.5

-0.3

58.25

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040135

4781931 - 4801342

19412

ENSAPLT00000025176

4780931 - 4793631

12701

ENSAPLT00000018600

4780931 - 4793631

12701