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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4792951_4797242_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4792951 - 4797242

Intron Length:

4292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTCAGTGCC

5'SS Class:

major

3'SS Sequence:

CGGTGTCCGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTAAC

U12 Branch Point Sequence:

TCCCCGCTAACC

Flanking Amino Acid:

DVTLGMPCRRKLSCSMQSEE

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.3

68.2

38.2

Major BPS

57.1

0.18

1.1

Major PPT

59.9

0.22

1.1

54.3

41.5

Minor 5ss

28.9

-2.4

2.9

28.7

35.6

Minor BPS

46.4

-0.2

2.3

60.5

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040135

4781931 - 4801342

19412