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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4806929_4807203_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4806929 - 4807203

Intron Length:

275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

ACCTCTGCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTGAA

U12 Branch Point Sequence:

GTAACCTGAAGC

Flanking Amino Acid:

RRALNDRIMKVEYDFLSPFL

Intron Amino Acid Position:

696

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

60.8

0.27

51.3

35.5

Major PPT

71.2

0.48

0.9

61.6

39.4

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

51.3

0.02

1.8

62.25

42.3

Associated Gene:

Gene:

TFRC

Ensembl Gene ID:

ENSAPLG00000002774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002850

4806088 - 4817467

11380