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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4807345_4807815_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4807345 - 4807815

Intron Length:

471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

GGTTTGCTAACA

Flanking Amino Acid:

KFLVYDQDVKELGLNLDWLF

Intron Amino Acid Position:

649

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

0.63

0.7

72.5

25.6

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

47.9

-0.1

2.3

65.35

40.7

Associated Gene:

Gene:

TFRC

Ensembl Gene ID:

ENSAPLG00000002774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002850

4806088 - 4817467

11380