Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_4811309_4811603_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4811309 - 4811603

Intron Length:

295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGCA

5'SS Class:

major

3'SS Sequence:

GTCTCCTTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

AGATCTTGATGT

Flanking Amino Acid:

FGAITGFEEPDRYVVIGAQR

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

68.7

36.4

Major BPS

83.8

0.84

73.6

41.8

Major PPT

78.4

0.64

0.8

73.2

31.7

Minor 5ss

36.3

-1.6

3.3

48.6

47.1

Minor BPS

45.4

-0.2

1.9

60.89

42.6

Associated Gene:

Gene:

TFRC

Ensembl Gene ID:

ENSAPLG00000002774

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002850

4806088 - 4817467

11380