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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4830498_4830576_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4830498 - 4830576

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCGTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGGAAA

U12 Branch Point Sequence:

TGCCACCGACCT

Flanking Amino Acid:

CPCLPRITMSRSKLRLLMLG

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

46.6

-0.2

1.4

53.4

40.4

Major PPT

64.2

0.32

56.8

38.7

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

39.9

-0.6

57.27

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027071

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037496

4829410 - 4831693

2284

ENSAPLT00000034689

4829545 - 4831693

2149

ENSAPLT00000029703

4829545 - 4831693

2149