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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4830919_4831051_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4830919 - 4831051

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCCG

5'SS Class:

strong_major

3'SS Sequence:

GTTGTGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGGGAC

U12 Branch Point Sequence:

GTGTCCTCCTCC

Flanking Amino Acid:

NIQAKFTCFQVLLVLTALQP

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

66.3

45.2

Major BPS

42.6

-0.4

1.5

34.5

43.7

Major PPT

0.61

69.6

41.6

Minor 5ss

38.2

-1.3

48.4

47.3

Minor BPS

-0.9

3.6

59.28

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027071

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037496

4829410 - 4831693

2284

ENSAPLT00000034689

4829545 - 4831693

2149

ENSAPLT00000029703

4829545 - 4831693

2149