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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4841501_4842215_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4841501 - 4842215

Intron Length:

715

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TCCCCAACTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

TGTTCCCCAACT

Flanking Amino Acid:

DDVYKHIKEAGMFAPTQRTE

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

77.8

38.7

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

66.9

0.38

0.8

63.3

31.7

Minor 5ss

32.4

-2

40.4

45.7

Minor BPS

0.55

1.9

86.5

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029174

4831877 - 4849265

17389

ENSAPLT00000003381

4835170 - 4849605

14436