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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4842295_4843079_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4842295 - 4843079

Intron Length:

785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAATACGT

5'SS Class:

major

3'SS Sequence:

TCCTAATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTATTCCTAATT

Flanking Amino Acid:

LTPEFLAEHRIDFVAHDDIP

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.1

59.2

45.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

80.3

0.68

0.9

35.9

Minor 5ss

33.3

-1.9

3.2

40.3

45.2

Minor BPS

68.7

0.67

1.6

85.26

34.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029174

4831877 - 4849265

17389

ENSAPLT00000003381

4835170 - 4849605

14436