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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4847250_4849124_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4847250 - 4849124

Intron Length:

1875

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTC|GTAAGTAAG

5'SS Class:

major

3'SS Sequence:

TCTGGCTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

GCGTCCTCACAG

Flanking Amino Acid:

VPPKMSRRSVGLREPAPFSD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.3

70.6

41.3

Major BPS

72.4

0.56

73.5

32.5

Major PPT

76.3

0.59

0.9

73.3

37.2

Minor 5ss

36.6

-1.5

2.7

38.4

Minor BPS

44.4

-0.5

45.5

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003305

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029174

4831877 - 4849265

17389

ENSAPLT00000003381

4835170 - 4849605

14436